API

The central class:

TreeData([X, obs, var, uns, obsm, obst, ...])

AnnData with trees.

Combining

Combining TreeData objects:

concat(tdatas, *[, axis, join, merge, ...])

Concatenates TreeData objects along an axis.

Read

Reading TreeData objects:

read_h5td([filename, backed])	Read .h5td or .h5ad-formatted hdf5 file.
read_zarr(store)	Read from a hierarchical Zarr array store.

Write

Writing TreeData objects:

TreeData.write_h5td([filename, compression, ...])	Write .h5td-formatted hdf5 file.
TreeData.write_zarr(store[, chunks])	Write a hierarchical Zarr array store.